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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
403
total RNA-seq
7
ATAC-seq
6
WGBS
4
DNase-seq
3
small RNA-seq
2
pCHi-C
1
RNA microarray
Assay category
406
Transcription
DNA binding
11
DNA accessibility
6
DNA methylation
Date released
386
February, 2021
12
July, 2019
8
October, 2019
7
August, 2017
3
February, 2020
1
August, 2018
1
August, 2021
1
February, 2023
1
January, 2018
1
June, 2019
1
March, 2020
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
Available data
413
bigWig
412
bam
406
tsv
9
bed narrowPeak
7
fastq
6
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bedpe bed3+
Organism
425
Homo sapiens
Biosample type
423
tissue
2
primary cell
1
in vitro differentiated cells
Organ
728
pancreas
531
connective tissue
418
adipose tissue
395
epithelium
302
kidney
259
heart
239
liver
159
bone element
134
vasculature
131
blood vessel
107
artery
68
brain
57
musculature of body
56
eye
56
limb
20
lung
18
ureter
16
skeleton
15
embryo
9
blood
9
bodily fluid
8
nerve
5
spleen
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
426
AMP
Genome assembly (visualization)
414
hg19
413
GRCh38
Lab
426
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
426 results
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total RNA-seq
ATAC-seq
WGBS
DNase-seq
small RNA-seq
pCHi-C
RNA microarray
tissue
adipose tissue
382
3
3
1
subcutaneous adipose tissue
7
1
1
1
omental fat pad
5
1
2
1
tibial nerve
5
1
2
subcutaneous abdominal adipose tissue
3
+ See 2 more…
primary cell
mesenchymal stem cell of adipose
1
1
in vitro differentiated cells
white fat cell
1
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