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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
5
total RNA-seq
4
DNase-seq
2
Hi-C
1
ATAC-seq
1
FAIRE-seq
Assay category
6
DNA accessibility
5
Transcription
2
3D chromatin structure
Date released
11
October, 2019
1
February, 2020
1
March, 2020
Available data
10
bam
10
bigWig
6
bed narrowPeak
5
bigBed narrowPeak
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
2
hic
1
bedpe bed3+
1
tar
Organism
13
Homo sapiens
Biosample type
8
tissue
5
primary cell
Organ
728
pancreas
531
connective tissue
418
adipose tissue
395
epithelium
302
kidney
259
heart
239
liver
159
bone element
134
vasculature
131
blood vessel
107
artery
68
brain
57
musculature of body
56
eye
56
limb
20
lung
18
ureter
16
skeleton
15
embryo
9
blood
9
bodily fluid
8
nerve
5
spleen
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
13
AMP
Genome assembly (visualization)
12
hg19
9
GRCh38
Lab
13
AMP-T2D consortium
Audit category:
1
audit script error
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
13 results
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Clear Filters
total RNA-seq
DNase-seq
Hi-C
ATAC-seq
FAIRE-seq
tissue
tibial nerve
5
2
1
primary cell
endothelial cell of umbilical vein
2
2
1
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