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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
ChIP-seq
11
DNase-seq
1
FAIRE-seq
Assay category
93
DNA binding
12
DNA accessibility
Target of assay
89
histone
89
histone modification
57
broad histone mark
32
narrow histone mark
4
RNA binding protein
4
transcription factor
Date released
59
October, 2019
39
May, 2019
5
June, 2019
2
November, 2017
Available data
222
bam
181
bigWig
156
bed narrowPeak
105
bigBed narrowPeak
73
tsv
15
bed broadPeak
15
bigBed broadPeak
13
bed bed3+
6
tagAlign
3
fastq
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
105
Homo sapiens
Biosample type
88
tissue
17
primary cell
Organ
358
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
105
AMP
Genome assembly (visualization)
104
GRCh38
104
hg19
Lab
105
AMP-T2D consortium
BIOSAMPLE
ASSAY
105 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
tibial nerve
24
2
tibial artery
18
2
ascending aorta
13
1
thoracic aorta
12
aorta
11
+ See 1 more…
primary cell
endothelial cell of umbilical vein
10
2
1
brain microvascular endothelial cell
2
1
kidney capillary endothelial cell
1
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