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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ChIP-seq
11
DNase-seq
4
ATAC-seq
Assay category
39
DNA binding
15
DNA accessibility
Target of assay
33
histone
33
histone modification
20
broad histone mark
13
narrow histone mark
6
RNA binding protein
6
transcription factor
Date released
29
October, 2019
15
June, 2019
5
October, 2018
3
August, 2017
1
November, 2018
1
November, 2020
Available data
635
bam
601
bigWig
483
tsv
102
bed narrowPeak
101
fastq
54
bigBed narrowPeak
29
bed bed3+
22
tagAlign
12
bed broadPeak
11
bigBed broadPeak
6
bed bed3
4
bed bedgraph
3
bed bedMethyl
3
bigBed bedMethyl
1
bedpe bed3+
1
hdf5
Organism
54
Homo sapiens
Biosample type
36
tissue
15
primary cell
3
in vitro differentiated cells
Organ
358
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
spleen
13
vein
10
adipose tissue
6
eye
Project
54
AMP
Genome assembly (visualization)
53
hg19
51
GRCh38
Lab
54
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
organ_slims!
spleen
BIOSAMPLE
ASSAY
54 results
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ChIP-seq
DNase-seq
ATAC-seq
tissue
tibial nerve
24
2
omental fat pad
3
2
subcutaneous adipose tissue
2
1
adipose tissue
1
1
primary cell
cardiac fibroblast
3
3
mesenchymal stem cell
6
brain pericyte
1
hepatic stellate cell
1
osteoblast
1
in vitro differentiated cells
adipocyte
1
2
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