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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
67
total RNA-seq
35
ChIP-seq
1
pCHi-C
Assay category
67
Transcription
35
DNA binding
DNA accessibility
Target of assay
24
histone
24
histone modification
16
broad histone mark
11
control
8
narrow histone mark
Date released
142
February, 2021
39
October, 2019
4
February, 2023
1
February, 2020
1
May, 2021
Available data
97
bam
88
txt
86
bigWig
63
tsv
24
bed narrowPeak
24
bigBed narrowPeak
Organism
187
Homo sapiens
Biosample type
186
tissue
1
primary cell
Organ
773
pancreas
762
liver
650
connective tissue
483
adipose tissue
401
epithelium
276
heart
249
brain
191
kidney
178
vasculature
174
blood vessel
147
bone element
92
artery
78
limb
61
musculature of body
60
blood
60
bodily fluid
40
nerve
37
embryo
29
eye
23
spleen
19
vein
10
lung
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
186
AMP
1
T1D
Genome assembly (visualization)
86
GRCh38
86
hg19
Lab
186
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
187 results
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RNA microarray
total RNA-seq
ChIP-seq
pCHi-C
tissue
bone element
84
bone tissue
58
tibial nerve
5
35
acetabular part of hip bone
1
ilium
1
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primary cell
megakaryocyte
1
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