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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
67
total RNA-seq
11
ChIP-seq
4
ATAC-seq
1
pCHi-C
Assay category
67
Transcription
11
DNA binding
4
DNA accessibility
Target of assay
11
control
Date released
142
February, 2021
15
October, 2019
8
February, 2023
1
February, 2020
1
May, 2021
Available data
108
bam
89
bigWig
88
txt
63
tsv
bed narrowPeak
26
bigBed narrowPeak
4
bed bed3
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
167
Homo sapiens
Biosample type
166
tissue
1
primary cell
Organ
732
pancreas
609
connective tissue
478
adipose tissue
373
epithelium
350
liver
202
heart
171
kidney
151
bone element
103
vasculature
101
blood vessel
83
brain
67
artery
36
musculature of body
30
limb
28
eye
23
embryo
20
lung
16
nerve
15
blood
15
bodily fluid
11
spleen
9
vein
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
166
AMP
1
T1D
Genome assembly (visualization)
66
hg19
62
GRCh38
Lab
166
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
167 results
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RNA microarray
total RNA-seq
ChIP-seq
ATAC-seq
pCHi-C
tissue
bone element
84
bone tissue
58
tibial nerve
5
11
acetabular part of hip bone
1
1
ilium
1
1
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primary cell
megakaryocyte
1
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