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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
67
total RNA-seq
35
ChIP-seq
13
ATAC-seq
2
DNase-seq
Assay category
67
Transcription
35
DNA binding
15
DNA accessibility
Target of assay
24
histone
24
histone modification
16
broad histone mark
11
control
8
narrow histone mark
Date released
150
February, 2021
42
October, 2019
8
February, 2023
1
February, 2020
Available data
108
bam
89
bigWig
88
txt
63
tsv
35
bed narrowPeak
26
bigBed narrowPeak
4
bed bed3
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
201
Homo sapiens
Biosample type
201
tissue
primary cell
Organ
777
liver
645
connective tissue
600
pancreas
489
adipose tissue
380
heart
318
kidney
265
brain
199
blood vessel
199
vasculature
158
bone element
139
artery
122
limb
118
epithelium
82
musculature of body
61
blood
bodily fluid
56
eye
43
nerve
37
embryo
25
spleen
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
201
AMP
Genome assembly (visualization)
101
hg19
97
GRCh38
Lab
201
AMP-T2D consortium
Audit category:
84
inconsistent ontology term
organ_slims!
bodily fluid
biosample_type!
primary cell
BIOSAMPLE
ASSAY
201 results
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RNA microarray
total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
tissue
bone element
84
bone tissue
58
tibial nerve
5
35
1
2
acetabular part of hip bone
1
1
ilium
1
1
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