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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ChIP-seq
5
total RNA-seq
1
ATAC-seq
1
pCHi-C
Assay category
35
DNA binding
5
Transcription
1
DNA accessibility
Target of assay
24
histone
24
histone modification
16
broad histone mark
11
control
8
narrow histone mark
Date released
40
October, 2019
1
February, 2020
1
March, 2020
Available data
42
bam
31
bigWig
27
bed narrowPeak
26
bigBed narrowPeak
6
tsv
2
bed bed3+
bed broadPeak
2
bigBed broadPeak
Organism
42
Homo sapiens
Biosample type
42
tissue
Organ
925
pancreas
728
liver
674
connective tissue
502
epithelium
488
adipose tissue
363
heart
276
kidney
239
brain
219
vasculature
217
blood vessel
159
bone element
137
artery
86
limb
69
blood
69
bodily fluid
57
eye
50
musculature of body
41
nerve
37
embryo
24
spleen
20
lung
18
vein
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
42
AMP
Genome assembly (visualization)
29
GRCh38
29
hg19
Lab
42
AMP-T2D consortium
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
42 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
pCHi-C
tissue
tibial nerve
35
5
1
esophagus
1
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