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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
ChIP-seq
36
DNase-seq
8
ATAC-seq
4
total RNA-seq
1
WGBS
Assay category
58
DNA binding
44
DNA accessibility
4
Transcription
1
DNA methylation
Target of assay
42
histone
42
histone modification
30
broad histone mark
16
control
12
narrow histone mark
Date released
68
October, 2019
32
June, 2019
May, 2019
6
February, 2021
1
July, 2019
Available data
107
bam
86
bed narrowPeak
85
bigWig
78
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
107
Homo sapiens
Biosample type
107
tissue
Organ
687
pancreas
681
liver
593
connective tissue
442
adipose tissue
312
epithelium
215
brain
190
heart
139
kidney
135
vasculature
130
blood vessel
107
limb
97
artery
66
bone element
60
blood
60
bodily fluid
50
musculature of body
42
nerve
36
embryo
24
spleen
20
vein
18
ureter
8
skeleton
7
eye
1
pericardium
1
pituitary gland
Project
107
AMP
Genome assembly (visualization)
91
GRCh38
90
hg19
Lab
107
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
May, 2019
BIOSAMPLE
ASSAY
107 results
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ChIP-seq
DNase-seq
ATAC-seq
total RNA-seq
WGBS
tissue
tibial nerve
35
2
1
4
tibial artery
23
2
1
muscle of arm
17
muscle of leg
13
1
distal epiphysis of femur
1
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