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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
83
ChIP-seq
22
ATAC-seq
10
DNase-seq
2
FAIRE-seq
Assay category
83
DNA binding
34
DNA accessibility
Target of assay
73
histone
73
histone modification
46
broad histone mark
27
narrow histone mark
10
transcription factor
6
RNA binding protein
Date released
40
October, 2018
33
October, 2019
17
August, 2017
14
September, 2018
5
September, 2017
4
June, 2019
3
November, 2018
1
May, 2019
Available data
731
bam
654
bigWig
471
fastq
422
tsv
241
bed narrowPeak
117
bigBed narrowPeak
80
zippedFastqFolder
31
bed bed3+
23
bed broadPeak
19
tagAlign
9
bigBed broadPeak
7
bedpe bed3+
7
hic
6
bed bedMethyl
6
bigBed bedMethyl
6
txt
3
cool
1
bedpe
1
hdf5
Organism
111
Homo sapiens
Biosample type
88
tissue
22
primary cell
7
cell line
Organ
358
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
117
AMP
Genome assembly (visualization)
115
GRCh38
115
hg19
Lab
117
AMP-T2D consortium
Audit category:
5
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
117 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
body of pancreas
26
4
tibial nerve
24
2
pancreas
13
2
1
endocrine pancreas
14
islet of Langerhans
1
1
primary cell
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
cell line
Panc1
6
1
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