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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
6
total RNA-seq
3
DNase-seq
2
ATAC-seq
2
WGBS
1
RRBS
1
pCHi-C
Assay category
55
DNA binding
6
Transcription
5
DNA accessibility
3
DNA methylation
Target of assay
30
histone
30
histone modification
20
broad histone mark
19
control
10
narrow histone mark
6
transcription factor
3
other context
3
other post-translational modification
Date released
42
October, 2019
9
November, 2018
7
December, 2018
7
January, 2019
2
July, 2019
1
February, 2020
1
March, 2020
1
October, 2017
Available data
67
bam
48
bigWig
41
bed narrowPeak
39
bigBed narrowPeak
24
fastq
7
tsv
3
bed bed3+
3
bed bedMethyl
3
bed broadPeak
3
bigBed bedMethyl
3
bigBed broadPeak
Organism
70
Homo sapiens
Biosample type
69
tissue
1
primary cell
Organ
946
pancreas
791
liver
684
connective tissue
524
epithelium
491
adipose tissue
354
kidney
353
heart
286
brain
236
vasculature
230
blood vessel
159
bone element
141
artery
122
limb
96
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
70
AMP
Genome assembly (visualization)
48
GRCh38
47
hg19
Lab
70
AMP-T2D consortium
BIOSAMPLE
ASSAY
70 results
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ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
WGBS
RRBS
pCHi-C
tissue
tibial nerve
35
5
2
1
spleen
20
1
1
2
1
pericardium
1
primary cell
pericardium fibroblast
1
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