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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
ChIP-seq
20
DNase-seq
1
ATAC-seq
Assay category
38
DNA binding
21
DNA accessibility
Target of assay
35
histone
35
histone modification
20
broad histone mark
15
narrow histone mark
3
transcription factor
Date released
27
October, 2019
18
June, 2019
8
December, 2017
6
February, 2018
Available data
96
bam
78
bigWig
59
bed narrowPeak
44
bigBed narrowPeak
27
fastq
23
bed bed3+
20
bed broadPeak
20
bigBed broadPeak
19
tsv
Organism
59
Homo sapiens
Biosample type
45
tissue
14
in vitro differentiated cells
Organ
441
liver
214
pancreas
203
brain
191
heart
183
kidney
151
epithelium
133
vasculature
129
blood vessel
92
limb
75
connective tissue
74
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
8
bone element
8
skeleton
1
pituitary gland
Project
59
AMP
Genome assembly (visualization)
59
GRCh38
59
hg19
Lab
59
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
3
inconsistent control read length
BIOSAMPLE
ASSAY
59 results
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ChIP-seq
DNase-seq
ATAC-seq
tissue
tibial nerve
24
2
1
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
in vitro differentiated cells
pancreatic endoderm
12
Hepatic endoderm
2
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