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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
126
ChIP-seq
Assay category
126
DNA binding
Target of assay
338
transcription factor
127
histone modification
126
histone
119
control
82
recombinant protein
68
narrow histone mark
58
RNA binding protein
58
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
32
August, 2017
29
October, 2019
27
May, 2020
17
December, 2017
15
November, 2017
6
August, 2021
Available data
106
bigWig
104
bed narrowPeak
103
bam
59
bigBed narrowPeak
58
tagAlign
44
fastq
14
bed broadPeak
14
bigBed broadPeak
3
bed bed3+
Organism
126
Homo sapiens
Biosample type
93
tissue
18
cell line
12
in vitro differentiated cells
3
primary cell
Organ
187
brain
151
pancreas
102
liver
93
epithelium
78
connective tissue
71
vasculature
70
blood vessel
62
heart
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
12
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
126
AMP
Genome assembly (visualization)
106
hg19
93
GRCh38
Lab
123
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
12
inconsistent control read length
BIOSAMPLE
ASSAY
126 results
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Clear Filters
ChIP-seq
tissue
liver
64
tibial nerve
24
right lobe of liver
5
cell line
HepG2
18
in vitro differentiated cells
hepatocyte
12
primary cell
hepatocyte
3
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