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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
7
ChIP-seq
2
DNase-seq
1
ATAC-seq
Assay category
54
Transcription
7
DNA binding
3
DNA accessibility
Target of assay
5
transcription factor
2
histone
2
histone modification
2
narrow histone mark
1
RNA binding protein
Date released
56
February, 2021
3
July, 2019
3
May, 2019
2
June, 2019
Available data
76
bam
64
bigWig
58
tsv
53
bed narrowPeak
6
tagAlign
5
bigBed narrowPeak
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
64
Homo sapiens
Biosample type
56
cell line
6
tissue
2
primary cell
Organ
623
pancreas
622
liver
570
connective tissue
425
adipose tissue
301
epithelium
222
brain
184
heart
155
vasculature
150
blood vessel
131
kidney
limb
85
artery
68
musculature of body
58
bone element
55
blood
55
bodily fluid
31
nerve
29
embryo
18
ureter
16
spleen
15
vein
6
eye
1
pericardium
1
pituitary gland
0
ovary
Project
64
AMP
Genome assembly (visualization)
64
GRCh38
64
hg19
Lab
64
AMP-T2D consortium
organ_slims!
limb
BIOSAMPLE
ASSAY
64 results
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total RNA-seq
ChIP-seq
DNase-seq
ATAC-seq
cell line
smooth muscle cell of the coronary artery
52
4
tissue
coronary artery
3
2
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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