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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
2
DNase-seq
Assay category
15
DNA binding
2
DNA accessibility
Target of assay
12
histone
12
histone modification
8
narrow histone mark
4
broad histone mark
3
RNA binding protein
3
transcription factor
Date released
June, 2019
12
November, 2017
3
October, 2017
2
November, 2018
Available data
213
bam
192
bigWig
173
bed narrowPeak
118
tagAlign
97
bigBed narrowPeak
27
tsv
21
fastq
17
bed broadPeak
8
bigBed broadPeak
5
bed bed3+
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
17
Homo sapiens
Biosample type
11
tissue
6
primary cell
Organ
61
liver
17
brain
17
pancreas
13
musculature of body
10
vasculature
8
blood vessel
8
epithelium
4
connective tissue
4
limb
4
vein
2
adipose tissue
2
artery
2
nerve
1
spleen
0
ovary
Project
17
AMP
Genome assembly (visualization)
17
hg19
16
GRCh38
Lab
17
AMP-T2D consortium
Audit category:
2
missing controlled_by
month_released!
June, 2019
BIOSAMPLE
ASSAY
17 results
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ChIP-seq
DNase-seq
tissue
brain
3
2
cingulate gyrus
2
middle frontal area 46
2
caudate nucleus
1
substantia nigra
1
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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