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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
289
total RNA-seq
153
ChIP-seq
62
ATAC-seq
11
snATAC-seq
8
DNase-seq
8
single cell RNA-seq
5
Hi-C
4
MeRIP-seq
4
WGBS
2
FAIRE-seq
2
RRBS
2
small RNA-seq
1
pCHi-C
Assay category
5
3D chromatin structure
Date released
1
August, 2021
1
March, 2019
1
March, 2020
1
November, 2019
1
October, 2019
Available data
3
bedpe bed3+
3
hic
1
bed bed3+
1
bedpe
1
bigWig
1
hdf5
Organism
5
Homo sapiens
Biosample type
4
tissue
1
cell line
Organ
9
pancreas
epithelium
6
musculature of body
5
blood vessel
5
vasculature
4
limb
4
liver
3
brain
3
heart
2
vein
1
connective tissue
1
kidney
Project
5
AMP
Genome assembly (visualization)
4
hg19
1
GRCh38
Lab
3
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
1
inconsistent assembly
organ_slims!
epithelium
BIOSAMPLE
ASSAY
5 results
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Hi-C
tissue
islet of Langerhans
3
pancreas
1
cell line
Panc1
1
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