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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
336
total RNA-seq
198
ChIP-seq
74
single cell RNA-seq
65
ATAC-seq
8
DNase-seq
4
WGBS
2
FAIRE-seq
2
small RNA-seq
Assay category
336
Transcription
Date released
116
July, 2018
89
August, 2017
40
May, 2021
26
February, 2021
26
September, 2018
20
November, 2019
6
April, 2018
6
May, 2022
3
March, 2020
2
July, 2019
2
October, 2018
Available data
336
bam
332
tsv
330
bigWig
184
fastq
6
txt
Organism
336
Homo sapiens
Biosample type
275
tissue
33
cell line
28
primary cell
Organ
467
connective tissue
395
adipose tissue
336
pancreas
159
liver
76
epithelium
69
heart
58
blood vessel
58
bone element
58
vasculature
54
artery
14
embryo
11
kidney
5
brain
4
limb
4
musculature of body
4
nerve
1
pericardium
Project
334
AMP
2
T1D
Genome assembly (visualization)
330
GRCh38
330
hg19
Lab
330
AMP-T2D consortium
6
Kyle Gaulton, UCSD
Audit category:
33
inconsistent ontology term
BIOSAMPLE
ASSAY
336 results
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Clear Filters
total RNA-seq
tissue
islet of Langerhans
272
body of pancreas
2
pancreas
1
cell line
EndoC_BH1
33
primary cell
pancreatic alpha cell
10
pancreatic beta cell
10
pancreatic acinar cell
4
pancreatic ductal cell
4
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