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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ATAC-seq
8
DNase-seq
Assay category
406
Transcription
157
DNA binding
67
DNA accessibility
4
DNA methylation
1
3D chromatin structure
Date released
20
November, 2019
14
September, 2018
7
August, 2020
5
October, 2017
5
September, 2017
4
August, 2017
4
June, 2019
3
September, 2020
2
March, 2019
2
November, 2018
1
October, 2019
Available data
54
bam
54
bed narrowPeak
45
bigWig
40
fastq
30
bigBed narrowPeak
8
bed broadPeak
7
bed bed3+
7
bigBed broadPeak
Organism
67
Homo sapiens
Biosample type
33
tissue
32
primary cell
2
cell line
Organ
154
kidney
77
heart
67
pancreas
57
vasculature
55
blood vessel
51
epithelium
49
artery
44
limb
34
brain
33
musculature of body
18
ureter
14
connective tissue
8
bone element
8
liver
8
skeleton
5
adipose tissue
4
eye
3
nerve
2
spleen
2
vein
Project
57
AMP
10
HPAP
Genome assembly (visualization)
79
hg19
67
GRCh38
Lab
54
AMP-T2D consortium
10
Klaus Kaestner, Upenn
1
Bing Ren, UCSD
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
67 results
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Clear Filters
ATAC-seq
DNase-seq
tissue
islet of Langerhans
22
1
body of pancreas
4
4
pancreas
2
primary cell
pancreatic alpha cell
13
pancreatic beta cell
10
pancreatic acinar cell
5
pancreatic ductal cell
4
cell line
EndoC_BH1
1
Panc1
1
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