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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
total RNA-seq
37
single cell RNA-seq
8
snATAC-seq
Assay category
157
Transcription
8
DNA accessibility
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
55
February, 2023
53
October, 2018
40
May, 2021
39
April, 2018
39
November, 2019
19
September, 2020
11
September, 2017
9
March, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
February, 2021
6
July, 2019
5
March, 2019
5
October, 2017
4
June, 2019
4
November, 2020
3
August, 2018
3
October, 2019
3
October, 2022
2
August, 2021
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
153
bam
153
bigWig
153
tsv
39
fastq
Organism
165
Homo sapiens
Biosample type
128
tissue
37
primary cell
Organ
165
pancreas
33
epithelium
8
blood
8
bodily fluid
2
connective tissue
Project
157
AMP
8
T1D
Genome assembly (visualization)
153
GRCh38
153
hg19
Lab
157
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
5
inconsistent ontology term
biosample_type!
cell line
BIOSAMPLE
ASSAY
165 results
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total RNA-seq
single cell RNA-seq
snATAC-seq
tissue
islet of Langerhans
120
4
pancreas
4
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic ductal cell
3
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