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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
122
total RNA-seq
51
ChIP-seq
37
single cell RNA-seq
Assay category
159
Transcription
51
DNA binding
Target of assay
30
histone
30
histone modification
19
broad histone mark
11
control
11
narrow histone mark
10
transcription factor
6
RNA binding protein
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
55
February, 2023
53
October, 2018
40
May, 2021
39
April, 2018
39
November, 2019
19
September, 2020
11
September, 2017
9
March, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
February, 2021
6
July, 2019
5
March, 2019
5
October, 2017
4
June, 2019
4
November, 2020
3
August, 2018
3
October, 2019
3
October, 2022
2
August, 2021
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
206
bam
195
bigWig
155
tsv
76
fastq
40
bed narrowPeak
40
bigBed narrowPeak
Organism
210
Homo sapiens
Biosample type
171
tissue
39
primary cell
Organ
210
pancreas
35
epithelium
25
connective tissue
23
adipose tissue
Project
210
AMP
Genome assembly (visualization)
195
GRCh38
195
hg19
Lab
210
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
Audit category:
1
inconsistent control read length
biosample_type!
cell line
BIOSAMPLE
ASSAY
210 results
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Clear Filters
total RNA-seq
ChIP-seq
single cell RNA-seq
tissue
islet of Langerhans
120
body of pancreas
33
endocrine pancreas
16
pancreas
2
primary cell
pancreatic beta cell
9
pancreatic acinar cell
2
5
pancreatic alpha cell
7
pancreatic delta cell
4
pancreatic ductal cell
3
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