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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
8
DNase-seq
2
ATAC-seq
Assay category
12
DNA binding
10
DNA accessibility
Target of assay
12
histone
12
histone modification
8
broad histone mark
4
narrow histone mark
Date released
12
August, 2017
4
June, 2019
2
November, 2018
2
October, 2019
1
March, 2019
1
October, 2017
Available data
668
bam
598
bigWig
471
fastq
388
tsv
220
bed narrowPeak
110
bigBed narrowPeak
80
zippedFastqFolder
29
bed bed3+
22
bed broadPeak
19
tagAlign
8
bigBed broadPeak
6
bed bedMethyl
6
bedpe bed3+
6
bigBed bedMethyl
6
hic
6
txt
3
cool
1
bedpe
Organism
16
Homo sapiens
Biosample type
22
tissue
cell line
Organ
78
kidney
47
brain
46
musculature of body
36
limb
30
heart
22
epithelium
20
pancreas
18
ureter
17
vasculature
13
blood vessel
10
connective tissue
5
liver
4
artery
4
eye
4
vein
3
adipose tissue
2
nerve
1
spleen
Project
22
AMP
Genome assembly (visualization)
19
hg19
15
GRCh38
Lab
20
AMP-T2D consortium
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
Audit category:
1
inconsistent assembly
biosample_type!
cell line
BIOSAMPLE
ASSAY
22 results
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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
tissue
islet of Langerhans
6
2
pancreas
6
2
body of pancreas
4
tibial nerve
2
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