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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
1
ATAC-seq
1
DNase-seq
Assay category
19
DNA binding
2
DNA accessibility
Target of assay
18
histone
18
histone modification
9
broad histone mark
9
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
12
November, 2019
7
October, 2019
1
March, 2020
1
May, 2021
Available data
63
bam
56
bigWig
34
tsv
21
bed narrowPeak
7
bigBed narrowPeak
2
bed bed3+
1
bed broadPeak
1
bedpe bed3+
1
bigBed broadPeak
1
hdf5
1
hic
Organism
21
Homo sapiens
Biosample type
123
tissue
68
primary cell
21
cell line
2
in vitro differentiated cells
Organ
308
liver
54
blood
54
bodily fluid
21
pancreas
15
epithelium
12
artery
12
blood vessel
12
heart
12
vasculature
8
kidney
Project
19
AMP
2
T1D
Genome assembly (visualization)
21
GRCh38
21
hg19
Lab
21
AMP-T2D consortium
Audit category:
14
inconsistent ontology term
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
ATAC-seq
DNase-seq
cell line
EndoC_BH1
13
1
Panc1
6
1
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