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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
397
total RNA-seq
74
single cell RNA-seq
2
small RNA-seq
Assay category
473
Transcription
218
DNA binding
173
DNA accessibility
53
DNA methylation
9
3D chromatin structure
Date released
157
July, 2018
89
August, 2017
42
February, 2023
41
May, 2021
39
April, 2018
26
February, 2021
26
September, 2018
20
November, 2019
16
September, 2020
5
March, 2020
4
July, 2019
3
August, 2018
2
October, 2018
1
August, 2021
1
February, 2020
1
June, 2018
Available data
412
bam
408
tsv
406
bigWig
253
fastq
txt
Organism
473
Homo sapiens
Biosample type
285
tissue
155
primary cell
33
cell line
Organ
481
connective tissue
473
pancreas
401
adipose tissue
201
epithelium
193
liver
166
heart
67
blood vessel
67
vasculature
63
kidney
58
artery
58
bone element
24
brain
19
eye
14
embryo
9
lung
9
musculature of body
7
limb
5
nerve
1
pericardium
1
spinal cord
Project
411
AMP
53
HPAP
9
T1D
Genome assembly (visualization)
406
GRCh38
406
hg19
Lab
413
AMP-T2D consortium
53
Klaus Kaestner, Upenn
6
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
38
inconsistent ontology term
files.file_type!
txt
BIOSAMPLE
ASSAY
473 results
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total RNA-seq
single cell RNA-seq
small RNA-seq
tissue
islet of Langerhans
278
body of pancreas
3
2
pancreas
2
primary cell
pancreatic alpha cell
52
12
pancreatic beta cell
21
12
pancreatic acinar cell
4
12
pancreatic ductal cell
4
10
pancreatic delta cell
11
+ See 4 more…
cell line
EndoC_BH1
33
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