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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
7
DNase-seq
1
ATAC-seq
Assay category
12
DNA binding
8
DNA accessibility
Target of assay
12
histone
12
histone modification
8
broad histone mark
4
narrow histone mark
Date released
12
August, 2017
4
June, 2019
2
November, 2018
March, 2019
1
October, 2017
1
October, 2019
Available data
688
bam
623
bigWig
470
fastq
417
tsv
214
bed narrowPeak
91
bigBed narrowPeak
80
zippedFastqFolder
29
bed bed3+
20
bed broadPeak
19
tagAlign
7
bedpe bed3+
7
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
6
hic
txt
3
cool
1
hdf5
Organism
14
Homo sapiens
Biosample type
19
tissue
1
cell line
Organ
78
kidney
63
liver
47
brain
46
musculature of body
36
limb
30
heart
22
epithelium
20
pancreas
18
ureter
17
vasculature
13
blood vessel
10
connective tissue
4
artery
4
eye
4
vein
3
adipose tissue
2
nerve
1
spleen
Project
20
AMP
Genome assembly (visualization)
18
hg19
14
GRCh38
Lab
19
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
1
inconsistent assembly
files.file_type!
txt
month_released!
March, 2019
BIOSAMPLE
ASSAY
20 results
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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
tissue
pancreas
6
2
islet of Langerhans
6
1
body of pancreas
4
cell line
Panc1
1
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