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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
Hi-C
Assay category
10
3D chromatin structure
Date released
3
March, 2020
3
October, 2022
2
November, 2019
1
August, 2021
1
October, 2019
Available data
900
bam
807
bigWig
585
tsv
471
fastq
365
bed narrowPeak
185
bigBed narrowPeak
80
zippedFastqFolder
59
bed bed3+
51
bed broadPeak
37
bigBed broadPeak
25
tagAlign
14
bed bedMethyl
14
bigBed bedMethyl
10
bedpe bed3+
10
hic
6
txt
3
cool
1
bedpe
1
hdf5
Organism
10
Homo sapiens
Biosample type
6
tissue
3
primary cell
1
cell line
Organ
7
pancreas
5
epithelium
3
heart
2
blood vessel
2
liver
2
musculature of body
2
vasculature
1
adipose tissue
1
connective tissue
1
vein
Project
7
AMP
3
HPAP
Genome assembly (visualization)
9
hg19
Lab
6
AMP-T2D consortium
3
Klaus Kaestner, Upenn
1
Bing Ren, UCSD
Audit category:
3
audit script error
1
inconsistent ontology term
BIOSAMPLE
ASSAY
10 results
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Clear Filters
Hi-C
tissue
islet of Langerhans
2
heart
1
heart left ventricle
1
heart right ventricle
1
pancreas
1
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
cell line
EndoC_BH1
1
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