Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
WGBS
3
Hi-C
2
RRBS
Assay category
6
DNA methylation
3
3D chromatin structure
Date released
4
November, 2018
3
October, 2022
2
July, 2019
Available data
689
bam
623
bigWig
471
fastq
417
tsv
214
bed narrowPeak
91
bigBed narrowPeak
80
zippedFastqFolder
29
bed bed3+
21
bed broadPeak
19
tagAlign
7
bedpe bed3+
7
bigBed broadPeak
7
hic
6
bed bedMethyl
6
bigBed bedMethyl
6
txt
3
cool
1
bedpe
1
hdf5
Organism
9
Homo sapiens
Biosample type
6
tissue
3
primary cell
Organ
9
epithelium
9
pancreas
8
heart
4
kidney
4
musculature of body
3
connective tissue
3
liver
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
6
AMP
3
HPAP
Genome assembly (visualization)
5
hg19
4
GRCh38
Lab
6
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
BIOSAMPLE
ASSAY
9 results
search-icon
table-tab-icon
Clear Filters
WGBS
Hi-C
RRBS
tissue
pancreas
2
1
body of pancreas
2
islet of Langerhans
1
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
Download