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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
ChIP-seq
22
ATAC-seq
6
DNase-seq
2
FAIRE-seq
Assay category
58
DNA binding
30
DNA accessibility
Target of assay
48
histone
48
histone modification
29
broad histone mark
19
narrow histone mark
10
transcription factor
6
RNA binding protein
Date released
40
October, 2018
16
August, 2017
14
September, 2018
7
October, 2019
5
September, 2017
3
November, 2018
2
June, 2019
1
May, 2019
Available data
634
bam
605
bigWig
408
tsv
362
fastq
211
bed narrowPeak
88
bigBed narrowPeak
26
bed bed3+
17
bed broadPeak
13
tagAlign
7
hic
6
bedpe bed3+
5
bigBed broadPeak
3
cool
2
bed bedMethyl
2
bigBed bedMethyl
1
bedpe
Organism
83
Homo sapiens
Biosample type
59
tissue
22
primary cell
7
cell line
Organ
354
liver
97
kidney
91
heart
88
pancreas
84
limb
82
vasculature
78
blood vessel
70
epithelium
65
brain
54
blood
54
bodily fluid
47
musculature of body
27
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
88
AMP
Genome assembly (visualization)
88
GRCh38
88
hg19
Lab
88
AMP-T2D consortium
Audit category:
5
inconsistent control read length
inconsistent assembly
audit.WARNING.category!
inconsistent assembly
BIOSAMPLE
ASSAY
88 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
body of pancreas
26
2
pancreas
12
2
1
endocrine pancreas
14
islet of Langerhans
1
1
primary cell
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
cell line
Panc1
6
1
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