Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
22
ATAC-seq
12
DNase-seq
2
FAIRE-seq
Assay category
80
DNA binding
36
DNA accessibility
Target of assay
69
histone
69
histone modification
44
broad histone mark
25
narrow histone mark
11
transcription factor
7
RNA binding protein
Date released
40
October, 2018
27
October, 2019
17
August, 2017
14
September, 2018
6
June, 2019
5
September, 2017
4
May, 2019
3
November, 2018
Available data
791
bam
708
bigWig
tsv
471
fastq
288
bed narrowPeak
116
bigBed narrowPeak
80
zippedFastqFolder
33
bed bed3+
25
bed broadPeak
25
tagAlign
11
bigBed broadPeak
7
bedpe bed3+
7
hic
6
bed bedMethyl
6
bigBed bedMethyl
6
txt
3
cool
1
bedpe
1
hdf5
Organism
110
Homo sapiens
Biosample type
87
tissue
22
primary cell
7
cell line
Organ
358
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
116
AMP
Genome assembly (visualization)
114
GRCh38
114
hg19
Lab
116
AMP-T2D consortium
Audit category:
5
inconsistent control read length
1
inconsistent assembly
files.file_type!
tsv
BIOSAMPLE
ASSAY
116 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
body of pancreas
26
4
tibial artery
18
2
pancreas
13
2
1
endocrine pancreas
14
coronary artery
3
2
+ See 1 more…
primary cell
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
cell line
Panc1
6
1
See all biosamples
Download