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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
153
ChIP-seq
Assay category
153
DNA binding
65
DNA accessibility
Target of assay
140
histone
140
histone modification
88
broad histone mark
52
narrow histone mark
13
transcription factor
9
RNA binding protein
Date released
63
November, 2017
40
October, 2018
26
May, 2019
12
August, 2017
6
October, 2017
6
October, 2019
Available data
394
bam
333
bigWig
310
bed narrowPeak
165
fastq
153
bigBed narrowPeak
137
tagAlign
27
bed broadPeak
21
bed bed3+
6
bigBed broadPeak
1
tagAlign bed3+
Organism
147
Homo sapiens
Biosample type
141
tissue
6
cell line
6
primary cell
Organ
352
liver
94
brain
71
vasculature
69
blood vessel
64
heart
59
pancreas
54
blood
54
bodily fluid
48
limb
36
epithelium
24
kidney
24
nerve
21
artery
15
connective tissue
14
musculature of body
12
spleen
10
vein
6
adipose tissue
2
eye
Project
153
AMP
Genome assembly (visualization)
153
GRCh38
101
hg19
Lab
153
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
153 results
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ChIP-seq
tissue
body of pancreas
26
layer of hippocampus
16
endocrine pancreas
14
pancreas
13
temporal lobe
13
+ See 7 more…
cell line
Panc1
6
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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