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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
ChIP-seq
41
DNase-seq
22
ATAC-seq
2
FAIRE-seq
Assay category
73
DNA binding
65
DNA accessibility
Target of assay
63
histone
63
histone modification
38
broad histone mark
25
narrow histone mark
10
transcription factor
6
RNA binding protein
Date released
45
June, 2019
40
October, 2018
17
August, 2017
14
September, 2018
7
May, 2019
7
October, 2019
5
September, 2017
3
November, 2018
Available data
746
bam
691
bigWig
473
fastq
426
tsv
274
bed narrowPeak
138
bigBed narrowPeak
80
zippedFastqFolder
67
bed broadPeak
63
bed bed3+
40
bigBed broadPeak
34
tagAlign
10
bed bedMethyl
10
bigBed bedMethyl
9
bedpe bed3+
9
hic
7
txt
3
cool
1
bedpe
1
hdf5
Organism
132
Homo sapiens
Biosample type
100
tissue
31
primary cell
7
cell line
Organ
358
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
138
AMP
Genome assembly (visualization)
136
hg19
135
GRCh38
Lab
138
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
Audit category:
5
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
138 results
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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
FAIRE-seq
tissue
body of pancreas
26
4
muscle of leg
6
13
muscle of arm
17
pancreas
13
2
1
endocrine pancreas
14
+ See 3 more…
primary cell
pancreatic beta cell
7
skeletal muscle satellite cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
+ See 1 more…
cell line
Panc1
6
1
See all biosamples
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