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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
85
ChIP-seq
Assay category
85
DNA binding
Target of assay
85
histone
85
histone modification
46
broad histone mark
39
narrow histone mark
32
control
12
transcription factor
7
RNA binding protein
5
nucleotide modification
Date released
August, 2017
32
September, 2018
30
October, 2018
10
November, 2019
7
October, 2019
3
March, 2020
2
May, 2021
1
May, 2019
Available data
85
bam
84
bed narrowPeak
84
bigWig
48
fastq
37
bigBed narrowPeak
1
tagAlign
Organism
85
Homo sapiens
Biosample type
33
tissue
32
primary cell
19
cell line
1
in vitro differentiated cells
Organ
187
brain
85
pancreas
79
epithelium
71
vasculature
70
blood vessel
70
liver
62
heart
49
limb
30
kidney
24
nerve
20
artery
15
vein
14
musculature of body
12
embryo
9
connective tissue
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
81
AMP
4
T1D
Genome assembly (visualization)
84
GRCh38
84
hg19
Lab
85
AMP-T2D consortium
Audit category:
12
inconsistent ontology term
Audit category:
32
missing controlled_by
Audit category:
1
inconsistent control read length
month_released!
August, 2017
BIOSAMPLE
ASSAY
85 results
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Clear Filters
ChIP-seq
tissue
body of pancreas
17
endocrine pancreas
14
islet of Langerhans
2
primary cell
pancreatic ductal cell
13
pancreatic endocrine cell
11
pancreatic acinar cell
8
cell line
EndoC_BH1
12
Panc1
7
in vitro differentiated cells
pancreatic PP cell
1
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