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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
Assay category
55
DNA binding
Target of assay
109
histone
109
histone modification
55
broad histone mark
54
narrow histone mark
51
control
18
transcription factor
8
RNA binding protein
5
nucleotide modification
Date released
32
August, 2017
19
October, 2018
September, 2018
November, 2019
4
October, 2019
Available data
50
bigWig
47
bam
45
bed narrowPeak
35
fastq
30
bigBed narrowPeak
8
bed broadPeak
8
tagAlign
6
bed bed3+
Organism
51
Homo sapiens
Biosample type
41
tissue
10
primary cell
4
cell line
Organ
70
brain
57
heart
55
pancreas
45
blood vessel
45
vasculature
44
connective tissue
42
liver
34
limb
28
epithelium
20
adipose tissue
20
musculature of body
16
nerve
15
kidney
14
artery
9
vein
4
embryo
4
spleen
Project
55
AMP
Genome assembly (visualization)
50
hg19
46
GRCh38
Lab
55
AMP-T2D consortium
Audit category:
5
missing controlled_by
Audit category:
3
inconsistent control read length
1
inconsistent assembly
month_released!
November, 2019
September, 2018
BIOSAMPLE
ASSAY
55 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
14
body of pancreas
11
endocrine pancreas
8
pancreas
8
primary cell
pancreatic endocrine cell
4
pancreatic alpha cell
3
pancreatic beta cell
3
cell line
Panc1
4
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