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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
ChIP-seq
5
MeRIP-seq
Assay category
46
DNA binding
Target of assay
141
histone
141
histone modification
72
broad histone mark
69
narrow histone mark
51
control
18
transcription factor
8
RNA binding protein
5
nucleotide modification
Date released
21
August, 2017
11
October, 2018
6
October, 2019
6
September, 2017
5
November, 2020
November, 2019
1
May, 2019
1
May, 2021
Available data
40
bam
30
fastq
3
tagAlign
2
bed bed3+
Organism
50
Homo sapiens
Biosample type
29
tissue
12
primary cell
9
cell line
1
in vitro differentiated cells
Organ
108
liver
51
pancreas
35
connective tissue
31
brain
28
epithelium
24
adipose tissue
22
vasculature
21
blood vessel
20
heart
17
limb
12
kidney
11
nerve
9
artery
8
spleen
7
embryo
6
blood
6
bodily fluid
6
musculature of body
2
vein
1
eye
Project
51
AMP
Genome assembly (visualization)
2
GRCh38
2
hg19
Lab
46
AMP-T2D consortium
5
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
3
inconsistent ontology term
month_released!
November, 2019
BIOSAMPLE
ASSAY
51 results
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ChIP-seq
MeRIP-seq
tissue
islet of Langerhans
13
2
body of pancreas
9
pancreas
3
endocrine pancreas
2
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
cell line
Panc1
6
EndoC_BH1
3
in vitro differentiated cells
pancreatic PP cell
1
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