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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
Hi-C
Assay category
9
3D chromatin structure
Date released
3
March, 2020
3
October, 2022
2
November, 2019
1
March, 2019
October, 2019
Available data
879
bam
832
bigWig
583
tsv
471
fastq
393
bed narrowPeak
178
bigBed narrowPeak
80
zippedFastqFolder
57
bed bed3+
50
bed broadPeak
36
bigBed broadPeak
25
tagAlign
14
bed bedMethyl
14
bigBed bedMethyl
9
bedpe bed3+
9
hic
6
txt
3
cool
1
bedpe
Organism
9
Homo sapiens
Biosample type
5
tissue
3
primary cell
1
cell line
Organ
7
pancreas
5
epithelium
2
blood vessel
2
heart
2
liver
2
musculature of body
2
vasculature
1
kidney
1
vein
Project
6
AMP
3
HPAP
Genome assembly (visualization)
9
hg19
Lab
5
AMP-T2D consortium
3
Klaus Kaestner, Upenn
1
Bing Ren, UCSD
Audit category:
3
audit script error
1
inconsistent ontology term
month_released!
October, 2019
BIOSAMPLE
ASSAY
9 results
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Hi-C
tissue
islet of Langerhans
2
heart left ventricle
1
heart right ventricle
1
pancreas
1
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
cell line
EndoC_BH1
1
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