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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
Assay category
70
DNA binding
Target of assay
144
histone
144
histone modification
74
broad histone mark
70
narrow histone mark
47
control
19
transcription factor
9
RNA binding protein
5
nucleotide modification
Date released
34
August, 2017
15
September, 2018
11
October, 2018
4
November, 2019
3
March, 2020
October, 2019
2
May, 2021
1
May, 2019
Available data
66
bigWig
64
bam
56
bed narrowPeak
48
fastq
16
bigBed narrowPeak
7
tagAlign
6
bed bed3+
4
bed broadPeak
Organism
68
Homo sapiens
Biosample type
32
tissue
31
primary cell
6
cell line
1
in vitro differentiated cells
Organ
70
pancreas
58
liver
43
brain
40
epithelium
32
connective tissue
23
heart
16
vasculature
15
blood vessel
13
musculature of body
12
adipose tissue
10
kidney
8
embryo
2
artery
2
limb
2
spleen
1
blood
1
bodily fluid
1
eye
Project
66
AMP
4
T1D
Genome assembly (visualization)
66
hg19
64
GRCh38
Lab
70
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
26
missing controlled_by
Audit category:
6
inconsistent control read length
month_released!
October, 2019
BIOSAMPLE
ASSAY
70 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
16
body of pancreas
6
endocrine pancreas
6
pancreas
4
primary cell
pancreatic endocrine cell
12
pancreatic ductal cell
7
pancreatic acinar cell
4
pancreatic alpha cell
4
pancreatic beta cell
4
cell line
EndoC_BH1
6
in vitro differentiated cells
pancreatic PP cell
1
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