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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
single cell RNA-seq
13
ChIP-seq
6
total RNA-seq
3
ATAC-seq
1
DNase-seq
1
Hi-C
Assay category
39
Transcription
13
DNA binding
4
DNA accessibility
1
3D chromatin structure
Target of assay
7
histone
7
histone modification
6
control
4
broad histone mark
3
narrow histone mark
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
53
bam
47
bigWig
39
tsv
34
fastq
7
bed narrowPeak
7
bigBed narrowPeak
2
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
hdf5
Organism
57
Homo sapiens
Biosample type
33
primary cell
15
cell line
9
tissue
Organ
86
brain
69
limb
68
epithelium
57
pancreas
47
blood vessel
47
vasculature
42
nerve
30
kidney
26
artery
21
eye
21
vein
8
heart
7
liver
6
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
57
AMP
Genome assembly (visualization)
47
GRCh38
47
hg19
Lab
57
AMP-T2D consortium
Audit category:
1
inconsistent assembly
BIOSAMPLE
ASSAY
57 results
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single cell RNA-seq
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
Hi-C
primary cell
pancreatic delta cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
pancreatic alpha cell
3
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cell line
Panc1
13
1
1
tissue
islet of Langerhans
6
3
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