Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
total RNA-seq
6
WGBS
1
ATAC-seq
1
pCHi-C
1
single cell RNA-seq
Assay category
27
Transcription
6
DNA methylation
1
DNA accessibility
Date released
315
November, 2017
242
August, 2017
194
May, 2020
157
July, 2018
144
May, 2022
72
September, 2018
63
December, 2017
61
May, 2021
60
November, 2018
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
39
August, 2021
35
February, 2021
25
October, 2019
19
September, 2020
17
March, 2020
16
July, 2019
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
6
June, 2019
5
December, 2019
5
January, 2019
5
March, 2019
5
October, 2017
3
August, 2018
3
October, 2022
2
February, 2020
2
May, 2019
1
August, 2022
1
December, 2018
1
June, 2018
Available data
32
tsv
27
bam
26
bigWig
6
fastq
1
bed bed3
1
bed bed3+
1
bed narrowPeak
1
csv
Organism
35
Homo sapiens
Biosample type
28
cell line
6
primary cell
1
tissue
Organ
455
connective tissue
386
adipose tissue
150
bone element
66
artery
66
blood vessel
66
heart
66
vasculature
32
epithelium
32
pancreas
8
kidney
8
skeleton
6
limb
3
liver
Project
29
AMP
6
HPAP
Genome assembly (visualization)
28
hg19
27
GRCh38
Lab
29
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
26
inconsistent ontology term
1
inconsistent replicate
BIOSAMPLE
ASSAY
35 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
WGBS
ATAC-seq
pCHi-C
single cell RNA-seq
cell line
EndoC_BH1
26
HepG2
1
1
primary cell
pancreatic alpha cell
6
tissue
liver
1
Download