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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
total RNA-seq
4
ATAC-seq
3
ChIP-seq
2
RRBS
2
small RNA-seq
1
Hi-C
1
pCHi-C
Assay category
9
Transcription
4
DNA accessibility
3
DNA binding
2
DNA methylation
1
3D chromatin structure
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
14
bigWig
10
bam
10
tsv
3
bed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bedpe bed3+
1
hic
Organism
20
Homo sapiens
Biosample type
15
tissue
5
cell line
Organ
32
heart
20
brain
20
connective tissue
20
pancreas
19
epithelium
16
vasculature
15
blood vessel
15
musculature of body
13
adipose tissue
13
kidney
13
liver
5
limb
3
artery
2
intestine
2
pericardium
1
adrenal gland
1
esophagus
1
eye
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
13
AMP
7
T1D
Genome assembly (visualization)
17
hg19
10
GRCh38
Lab
20
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
BIOSAMPLE
ASSAY
20 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
RRBS
small RNA-seq
Hi-C
pCHi-C
tissue
islet of Langerhans
2
2
2
1
body of pancreas
2
2
pancreas
1
1
1
1
cell line
EndoC_BH1
2
2
1
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