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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
96
ChIP-seq
89
total RNA-seq
3
ATAC-seq
1
DNase-seq
1
FAIRE-seq
Assay category
96
DNA binding
89
Transcription
5
DNA accessibility
Target of assay
67
histone
67
histone modification
35
narrow histone mark
32
broad histone mark
22
control
7
transcription factor
2
RNA binding protein
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
170
bam
168
fastq
160
bigWig
89
tsv
50
bed narrowPeak
19
bed bed3+
18
bigBed narrowPeak
16
tagAlign
12
bed broadPeak
Organism
183
Homo sapiens
Biosample type
149
tissue
41
primary cell
Organ
190
pancreas
125
connective tissue
57
adipose tissue
54
liver
50
blood vessel
50
vasculature
34
epithelium
33
musculature of body
28
brain
21
heart
7
limb
5
artery
5
kidney
Project
190
AMP
Genome assembly (visualization)
160
hg19
153
GRCh38
Lab
190
AMP-T2D consortium
Audit category:
22
missing controlled_by
Audit category:
8
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
190 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
42
89
1
1
pancreas
14
body of pancreas
2
primary cell
pancreatic alpha cell
13
1
pancreatic beta cell
13
1
pancreatic endocrine cell
12
pancreatic acinar cell
1
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