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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
total RNA-seq
20
ATAC-seq
13
ChIP-seq
2
Hi-C
2
RRBS
2
small RNA-seq
Assay category
24
Transcription
20
DNA accessibility
13
DNA binding
2
3D chromatin structure
2
DNA methylation
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
57
bam
35
bigWig
31
bed narrowPeak
24
tsv
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hic
Organism
61
Homo sapiens
Biosample type
45
tissue
16
cell line
Organ
61
pancreas
29
epithelium
25
heart
19
connective tissue
18
brain
13
adipose tissue
12
vasculature
11
blood vessel
11
kidney
10
liver
10
musculature of body
5
limb
3
artery
2
pericardium
1
eye
Project
61
AMP
Genome assembly (visualization)
59
hg19
55
GRCh38
Lab
61
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
BIOSAMPLE
ASSAY
61 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
Hi-C
RRBS
small RNA-seq
tissue
islet of Langerhans
19
19
1
1
body of pancreas
2
2
pancreas
1
cell line
EndoC_BH1
1
1
13
1
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