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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
ChIP-seq
28
total RNA-seq
6
WGBS
Assay category
51
DNA binding
28
Transcription
6
DNA methylation
Target of assay
30
histone
30
histone modification
19
broad histone mark
11
control
11
narrow histone mark
10
transcription factor
6
RNA binding protein
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
79
bam
68
bigWig
43
fastq
40
bed narrowPeak
40
bigBed narrowPeak
34
tsv
Organism
85
Homo sapiens
Biosample type
51
tissue
26
cell line
8
primary cell
Organ
478
connective tissue
409
adipose tissue
150
bone element
85
pancreas
66
artery
66
blood vessel
66
heart
66
vasculature
34
epithelium
8
kidney
8
skeleton
6
limb
3
liver
Project
79
AMP
6
HPAP
Genome assembly (visualization)
68
GRCh38
68
hg19
Lab
79
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
26
inconsistent ontology term
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
85 results
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Clear Filters
ChIP-seq
total RNA-seq
WGBS
tissue
body of pancreas
33
endocrine pancreas
16
pancreas
2
cell line
EndoC_BH1
26
primary cell
pancreatic alpha cell
6
pancreatic acinar cell
2
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