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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
ChIP-seq
18
total RNA-seq
3
ATAC-seq
Assay category
51
DNA binding
18
Transcription
3
DNA accessibility
Target of assay
30
histone
30
histone modification
19
broad histone mark
11
control
11
narrow histone mark
10
transcription factor
6
RNA binding protein
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
56
fastq
53
bam
45
bigWig
40
bed narrowPeak
40
bigBed narrowPeak
2
tsv
Organism
72
Homo sapiens
Biosample type
51
tissue
21
primary cell
Organ
72
pancreas
23
adipose tissue
23
connective tissue
21
epithelium
Project
53
AMP
19
HPAP
Genome assembly (visualization)
45
GRCh38
42
hg19
Lab
53
AMP-T2D consortium
19
Klaus Kaestner, Upenn
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
72 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
tissue
body of pancreas
33
endocrine pancreas
16
pancreas
2
primary cell
pancreatic alpha cell
15
2
pancreatic acinar cell
2
pancreatic beta cell
1
1
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