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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
10
MeRIP-seq
3
ATAC-seq
1
DNase-seq
1
Hi-C
Assay category
13
DNA binding
4
DNA accessibility
1
3D chromatin structure
Target of assay
11
control
7
histone
7
histone modification
5
nucleotide modification
4
broad histone mark
3
narrow histone mark
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
14
bam
8
bigWig
7
bed narrowPeak
7
bigBed narrowPeak
2
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
hdf5
Organism
28
Homo sapiens
Biosample type
21
cell line
7
tissue
Organ
86
brain
69
limb
47
blood vessel
47
vasculature
42
nerve
41
epithelium
30
kidney
28
pancreas
26
artery
21
eye
21
vein
10
connective tissue
8
heart
7
liver
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
28
AMP
Genome assembly (visualization)
8
GRCh38
8
hg19
Lab
18
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
Audit category:
1
inconsistent assembly
BIOSAMPLE
ASSAY
28 results
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Clear Filters
ChIP-seq
MeRIP-seq
ATAC-seq
DNase-seq
Hi-C
cell line
Panc1
13
1
1
EndoC_BH1
6
tissue
islet of Langerhans
4
3
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