Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
total RNA-seq
23
ATAC-seq
13
ChIP-seq
2
Hi-C
Assay category
36
Transcription
23
DNA accessibility
13
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
53
bam
34
bigWig
31
bed narrowPeak
20
tsv
19
fastq
2
bedpe bed3+
2
hic
Organism
74
Homo sapiens
Biosample type
39
tissue
19
primary cell
16
cell line
Organ
74
pancreas
35
epithelium
1
adipose tissue
1
connective tissue
Project
55
AMP
19
HPAP
Genome assembly (visualization)
54
GRCh38
53
hg19
Lab
55
AMP-T2D consortium
19
Klaus Kaestner, Upenn
Audit category:
16
inconsistent ontology term
BIOSAMPLE
ASSAY
74 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
19
1
primary cell
pancreatic alpha cell
15
2
pancreatic beta cell
1
1
cell line
EndoC_BH1
1
1
13
1
Download