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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
8
snATAC-seq
3
ATAC-seq
1
DNase-seq
1
Hi-C
Assay category
13
DNA binding
12
DNA accessibility
1
3D chromatin structure
Target of assay
7
histone
7
histone modification
6
control
4
broad histone mark
3
narrow histone mark
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
14
bam
8
bigWig
7
bed narrowPeak
7
bigBed narrowPeak
2
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
hdf5
Organism
26
Homo sapiens
Biosample type
15
cell line
11
tissue
Organ
86
brain
69
limb
47
blood vessel
47
vasculature
42
nerve
35
epithelium
30
kidney
26
artery
26
pancreas
21
eye
vein
8
blood
8
bodily fluid
8
heart
7
liver
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
18
AMP
8
T1D
Genome assembly (visualization)
8
GRCh38
8
hg19
Lab
18
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent assembly
organ_slims!
vein
BIOSAMPLE
ASSAY
26 results
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Clear Filters
ChIP-seq
snATAC-seq
ATAC-seq
DNase-seq
Hi-C
cell line
Panc1
13
1
1
tissue
islet of Langerhans
4
3
pancreas
4
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