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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
271
total RNA-seq
2
small RNA-seq
1
ATAC-seq
1
pCHi-C
Assay category
273
Transcription
1
DNA accessibility
Date released
116
July, 2018
89
August, 2017
36
May, 2021
19
November, 2019
6
April, 2018
4
July, 2019
3
March, 2020
1
August, 2021
1
February, 2020
Available data
429
bam
373
bigWig
275
tsv
213
fastq
123
bed narrowPeak
62
bigBed narrowPeak
27
bed bed3+
20
bed broadPeak
16
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
6
bigBed broadPeak
6
txt
3
bedpe bed3+
3
hic
1
bedpe
Organism
275
Homo sapiens
Biosample type
275
tissue
108
primary cell
34
cell line
Organ
457
connective tissue
399
adipose tissue
275
pancreas
154
liver
111
heart
58
bone element
23
brain
14
blood vessel
14
vasculature
12
kidney
7
limb
7
musculature of body
5
eye
5
nerve
4
artery
3
epithelium
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
ovary
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
0
blood
Project
275
AMP
Genome assembly (visualization)
272
hg19
271
GRCh38
Lab
274
AMP-T2D consortium
1
Bing Ren, UCSD
BIOSAMPLE
ASSAY
275 results
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total RNA-seq
small RNA-seq
ATAC-seq
pCHi-C
tissue
islet of Langerhans
267
1
body of pancreas
3
2
pancreas
1
1
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