Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
113
ChIP-seq
22
ATAC-seq
8
DNase-seq
2
FAIRE-seq
Assay category
113
DNA binding
32
DNA accessibility
Target of assay
61
transcription factor
50
histone
50
histone modification
30
broad histone mark
20
narrow histone mark
16
RNA binding protein
10
chromatin remodeller
Date released
40
October, 2018
27
December, 2018
17
August, 2017
15
January, 2019
15
November, 2018
14
September, 2018
7
October, 2019
5
September, 2017
4
June, 2019
1
May, 2019
Available data
749
bam
678
bigWig
531
fastq
417
tsv
268
bed narrowPeak
145
bigBed narrowPeak
80
zippedFastqFolder
29
bed bed3+
21
bed broadPeak
19
tagAlign
7
bedpe bed3+
7
bigBed broadPeak
7
hic
6
bed bedMethyl
6
bigBed bedMethyl
6
txt
3
cool
1
bedpe
1
hdf5
Organism
139
Homo sapiens
Biosample type
62
tissue
61
cell line
22
primary cell
Organ
358
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
145
AMP
Genome assembly (visualization)
143
GRCh38
143
hg19
Lab
145
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
5
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
145 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
body of pancreas
26
4
pancreas
13
2
1
endocrine pancreas
14
islet of Langerhans
1
1
cell line
GM12878
54
Panc1
6
1
primary cell
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
Download