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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
10
MeRIP-seq
4
WGBS
2
DNase-seq
1
FAIRE-seq
Assay category
15
DNA binding
4
DNA methylation
3
DNA accessibility
Target of assay
12
transcription factor
8
control
5
nucleotide modification
2
RNA binding protein
2
chromatin remodeller
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
27
December, 2018
22
November, 2018
19
September, 2020
18
January, 2019
18
October, 2019
16
January, 2021
14
March, 2020
11
September, 2017
10
November, 2020
7
August, 2020
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
January, 2018
1
June, 2018
Available data
22
bam
22
fastq
19
bigWig
15
bed narrowPeak
15
bigBed narrowPeak
4
bed bedMethyl
4
bigBed bedMethyl
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
32
Homo sapiens
Biosample type
21
cell line
11
tissue
Organ
53
liver
17
pancreas
15
blood
15
bodily fluid
9
spleen
7
connective tissue
6
epithelium
2
brain
1
adipose tissue
Project
32
AMP
Genome assembly (visualization)
18
GRCh38
15
hg19
Lab
22
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
BIOSAMPLE
ASSAY
32 results
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Clear Filters
ChIP-seq
MeRIP-seq
WGBS
DNase-seq
FAIRE-seq
cell line
GM12878
15
EndoC_BH1
6
tissue
body of pancreas
2
2
islet of Langerhans
4
pancreas
2
1
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