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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
5
MeRIP-seq
Assay category
54
DNA binding
Target of assay
152
histone
152
histone modification
78
broad histone mark
74
narrow histone mark
70
transcription factor
59
control
19
RNA binding protein
10
chromatin remodeller
5
nucleotide modification
Date released
21
August, 2017
11
October, 2018
6
October, 2019
6
September, 2017
5
November, 2020
3
January, 2019
3
November, 2018
2
November, 2019
1
May, 2019
1
May, 2021
Available data
48
bam
36
fastq
3
tagAlign
2
bed bed3+
Organism
58
Homo sapiens
Biosample type
29
tissue
17
cell line
12
primary cell
1
in vitro differentiated cells
Organ
108
liver
53
pancreas
35
connective tissue
31
brain
30
epithelium
24
adipose tissue
22
vasculature
21
blood vessel
20
heart
17
limb
12
kidney
11
nerve
9
artery
8
spleen
7
embryo
6
blood
6
bodily fluid
6
musculature of body
2
vein
1
eye
0
pericardium
Project
59
AMP
Genome assembly (visualization)
2
GRCh38
2
hg19
Lab
54
AMP-T2D consortium
5
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
5
inconsistent ontology term
BIOSAMPLE
ASSAY
59 results
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Clear Filters
ChIP-seq
MeRIP-seq
tissue
islet of Langerhans
13
2
body of pancreas
9
pancreas
3
endocrine pancreas
2
cell line
GM12878
6
Panc1
6
EndoC_BH1
2
3
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
in vitro differentiated cells
pancreatic PP cell
1
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