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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
420
total RNA-seq
282
ChIP-seq
165
ATAC-seq
78
single cell RNA-seq
51
WGBS
27
DNase-seq
13
Hi-C
11
snATAC-seq
10
MeRIP-seq
8
RRBS
3
FAIRE-seq
2
Capture-C
2
small RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
RNA microarray
1
pCHi-C
Assay category
3
DNA accessibility
Date released
1
August, 2017
1
November, 2018
1
October, 2019
Available data
3
bam
3
bed narrowPeak
3
bigBed narrowPeak
3
bigWig
2
fastq
1
tar
Organism
3
Homo sapiens
Biosample type
2
tissue
1
primary cell
Organ
2
pancreas
1
blood vessel
1
brain
1
epithelium
1
kidney
1
vasculature
1
vein
Project
3
AMP
Genome assembly (visualization)
3
hg19
Lab
3
AMP-T2D consortium
BIOSAMPLE
ASSAY
3 results
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FAIRE-seq
tissue
islet of Langerhans
1
pancreas
1
primary cell
endothelial cell of umbilical vein
1
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